PROTEIN DATA BANK
Protein Data Bank is a repository for 3-D biological macro-molecular structure. it is an important source for research in the academic, pharmaceutical and biotechnology.
PDB data
- Information required includes
- Coordinates of all the atoms
- Chemical description of the various molecules in the crystal
- Experimental information about the structure
- Structural description of the biological molecule
Result of Protein images
SOFTWARE TOOLS
- To minimize the amount of manual labor
- Help scientist deposit their results quicker
- Help validate results
Commonly used software
- pdb_extract
- ADIT (Autodep Input Tool)
- PDB Validation Suite
Example of Table for Data Query
| Search Fields | Example |
| PDB ID | 4HHB, 2MHR |
| Deposition/Release Date | September 1 1996 |
| Contains Chain Type | Protein: Ignore, Enzyme: Yes, DNA |
| Citation Author | S.S. Taylor |
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